Saturday, January 28, 2012

Exhibition of QM/MM Artwork


This figure exhibited a QM/MM refined anti-Alzheimer drug Aricept (orange ball-stick model) binding in its active site (PDB id 1EVE). After QM/MM X-ray refinement, few coordinate errors of this drug molecule were fixed which optimized its spatial orientation and facilitated the π- π interaction between ligand and three key binding residues (W84, W279 and F330). The electron density map was interpreted at σ = 1.5 contour level. The complex was rendered using PYMOL v1.2r1.

Friday, January 20, 2012

Introduction

This is the research blog of the Merz research group. We work in the field of computational chemistry and biology at the University of Florida. Click here to visit the group's web site.

The intent of this blog is for members of the group to post information relevant to group members. This might include links to scientific papers (not the entire papers, please, for copyright reasons!), documentation and how-to guides, laboratory notebooks, and so forth.

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